STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23512.1KEGG: dbr:Deba_1413 hypothetical protein. (180 aa)    
Predicted Functional Partners:
AEH22539.1
PFAM: Organic solvent tolerance protein; KEGG: dps:DP3010 organic solvent tolerance protein (OstA).
 
 
 
 0.984
leuS
TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: tye:THEYE_A1204 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.922
AEH22134.1
PFAM: Permease YjgP/YjgQ, predicted; KEGG: nis:NIS_0386 hypothetical protein.
  
   
 0.787
AEH23609.1
KEGG: sfu:Sfum_3774 membrane protein-like.
  
  
 0.787
AEH23137.1
PFAM: DNA polymerase III, delta; KEGG: ssp:SSP1171 DNA polymerase III subunit delta.
 
    0.786
AEH22347.1
KEGG: dak:DaAHT2_2214 hypothetical protein.
  
     0.772
AEH23387.1
KEGG: pca:Pcar_3121 hypothetical protein.
  
     0.766
AEH22559.1
KEGG: dpr:Despr_1071 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
  
     0.761
AEH23435.1
KEGG: dpr:Despr_0597 hypothetical protein.
  
     0.750
AEH22184.1
Hypothetical protein; KEGG: pmx:PERMA_0605 putative peptidase M1, membrane alanine aminopeptidase.
  
     0.748
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.