STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23526.1TIGRFAM: CoA enzyme activase; KEGG: tye:THEYE_A1141 activator of (R)-2-hydroxyglutaryl-CoA dehydratase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type. (252 aa)    
Predicted Functional Partners:
AEH23525.1
PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: tye:THEYE_A1140 2-hydroxyglutaryl-CoA dehydratase, beta subunit-like protein.
 
 0.981
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
       0.491
AEH23522.1
Small GTP-binding protein; KEGG: ddf:DEFDS_1534 translation elongation factor G; TIGRFAM: Small GTP-binding protein; PFAM: Translation elongation factor EFG/EF2, domain IV; Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, C-terminal.
       0.475
AEH23523.1
Molybdenum cofactor synthesis domain protein; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
       0.475
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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