Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEH23700.1KEGG: hth:HTH_0612 hypothetical protein. (472 aa)    
Predicted Functional Partners:
AEH23609.1
KEGG: sfu:Sfum_3774 membrane protein-like.
  
     0.769
AEH22123.1
Pilin; KEGG: aae:aq_1434 pilin.
  
     0.765
AEH22364.1
Hypothetical protein; KEGG: sat:SYN_00931 integrin-like repeat-containing protein.
  
     0.762
AEH23532.1
KEGG: hth:HTH_1464 integral membrane protein.
  
     0.762
AEH22560.1
KEGG: dte:Dester_0979 hypothetical protein.
 
    0.761
AEH23387.1
KEGG: pca:Pcar_3121 hypothetical protein.
  
     0.756
AEH22784.1
PFAM: Rickettsia 17kDa surface antigen; KEGG: tal:Thal_0566 17 kDa surface antigen.
  
     0.738
AEH22347.1
KEGG: dak:DaAHT2_2214 hypothetical protein.
  
     0.720
AEH22196.1
PFAM: Phosphatidate cytidylyltransferase; KEGG: aae:aq_1542 hypothetical protein.
  
     0.711
AEH22742.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: hth:HTH_1631 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.698
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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