Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH23703.1KEGG: cki:Calkr_1729 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2. (151 aa)    
Predicted Functional Partners:
AEH23702.1
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: saf:SULAZ_0637 fumarate hydratase, class I; PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region.
       0.778
AEH23701.1
PFAM: ApbE-like lipoprotein; KEGG: sfu:Sfum_2124 hypothetical protein.
       0.773
AEH22350.1
Cysteine desulfurase; KEGG: dth:DICTH_0557 aminotransferase, class V superfamily; PFAM: Aminotransferase, class V/Cysteine desulfurase.
  
  
 0.725
serS
Seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.503
AEH23700.1
KEGG: hth:HTH_0612 hypothetical protein.
       0.437
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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