Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
byslBystin-like. (466 aa)    
Predicted Functional Partners:
ltv1
Protein LTV1 homolog; Belongs to the LTV1 family.
   
 0.999
nob1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.999
pno1
RNA-binding protein PNO1; Positively regulates dimethylation of two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA. Belongs to the PNO1 family.
   
 
 0.998
rrp12
Ribosomal RNA-processing 12 homolog.
   
 
 0.998
riok2
RIO kinase 2 (yeast).
   
 0.998
nop14
NOP14 nucleolar protein homolog (yeast).
   
 
 0.997
nop9
Uncharacterized protein.
   
 0.996
noc4l
Nucleolar complex protein 4 homolog.
   
 0.995
bms1
BMS1 ribosome biogenesis factor.
   
 
 0.994
nol10
Nucleolar protein 10.
   
 
 0.993
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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