Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
F1R4C2_DANRESi:busm1-57f23.1. (144 aa)    
Predicted Functional Partners:
B0S629_DANRE
Si:dkeyp-73d8.9.
      
 0.683
cst14a.2
Cystatin 14a, tandem duplicate 2; Belongs to the cystatin family.
    
 0.654
spata5l1
Spermatogenesis-associated 5-like 1.
    
 
 0.595
ccdc58
Coiled-coil domain-containing protein 58; Belongs to the CCDC58 family.
      
 0.568
ovch2
Ovochymase 2; Belongs to the peptidase S1 family.
     
 0.561
zp2.1
Zona pellucida glycoprotein 2, tandem duplicate 1.
    
 
 0.555
LOC569153
Uncharacterized protein.
   
  
 0.552
LOC100005356
Uncharacterized protein.
   
  
 0.552
LOC108191752
Uncharacterized protein.
   
  
 0.551
LOC100005129
Uncharacterized protein.
   
  
 0.551
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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