STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F1R4C2_DANRESi:busm1-57f23.1. (144 aa)    
Predicted Functional Partners:
spata5l1
Spermatogenesis-associated 5-like 1.
    
 
 0.743
cst14a.2
Cystatin 14a, tandem duplicate 2; Belongs to the cystatin family.
   
 
 0.670
ccdc58
Coiled-coil domain-containing protein 58; Belongs to the CCDC58 family.
      
 0.582
fetub
Fetuin B.
   
  
 0.565
LOC108191752
Uncharacterized protein.
   
  
 0.547
LOC569153
Uncharacterized protein.
   
  
 0.547
LOC100005129
Uncharacterized protein.
   
  
 0.547
LOC100005356
Uncharacterized protein.
   
  
 0.547
ctss2.2
Cathepsin S, ortholog 2, tandem duplicate 2; Belongs to the peptidase C1 family.
   
  
 0.540
ctss1
Cathepsin S, ortholog 1; Belongs to the peptidase C1 family.
      
 0.540
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.