Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
daxx | dnmt1 | ENSDARP00000105452 | ENSDARP00000013243 | Death-domain-associated protein. | DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.693 |
daxx | mdm2 | ENSDARP00000105452 | ENSDARP00000072320 | Death-domain-associated protein. | E3 ubiquitin-protein ligase Mdm2; E3 ubiquitin-protein ligase that mediates ubiquitination of p53/TP53, leading to its degradation by the proteasome. | 0.960 |
daxx | rps27a | ENSDARP00000105452 | ENSDARP00000128775 | Death-domain-associated protein. | Ribosomal protein S27a. | 0.566 |
daxx | tp53 | ENSDARP00000105452 | ENSDARP00000116736 | Death-domain-associated protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of bax and fas antigen expression, or by repression of Bcl-2 expression. | 0.967 |
daxx | usp7 | ENSDARP00000105452 | ENSDARP00000002502 | Death-domain-associated protein. | Ubiquitin-specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. | 0.978 |
dnmt1 | daxx | ENSDARP00000013243 | ENSDARP00000105452 | DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Death-domain-associated protein. | 0.693 |
dnmt1 | rps27a | ENSDARP00000013243 | ENSDARP00000128775 | DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Ribosomal protein S27a. | 0.879 |
dnmt1 | tp53 | ENSDARP00000013243 | ENSDARP00000116736 | DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of bax and fas antigen expression, or by repression of Bcl-2 expression. | 0.920 |
dnmt1 | uhrf1 | ENSDARP00000013243 | ENSDARP00000135054 | DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | E3 ubiquitin-protein ligase UHRF1; Multidomain protein that acts as a key epigenetic regulator by bridging DNA methylation and chromatin modification. Specifically recognizes and binds hemimethylated DNA at replication forks via its YDG domain and recruits dnmt1 methyltransferase to ensure faithful propagation of the DNA methylation patterns through DNA replication. In addition to its role in maintenance of DNA methylation, also plays a key role in chromatin modification: through its tudor-like regions and PHD-type zinc fingers, specifically recognizes and binds histone H3 trimethylate [...] | 0.998 |
dnmt1 | usp7 | ENSDARP00000013243 | ENSDARP00000002502 | DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Ubiquitin-specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. | 0.972 |
foxo3a | foxo3b | ENSDARP00000036177 | ENSDARP00000062981 | Forkhead box O3A. | Forkhead box O3b. | 0.907 |
foxo3a | mdm2 | ENSDARP00000036177 | ENSDARP00000072320 | Forkhead box O3A. | E3 ubiquitin-protein ligase Mdm2; E3 ubiquitin-protein ligase that mediates ubiquitination of p53/TP53, leading to its degradation by the proteasome. | 0.538 |
foxo3a | tp53 | ENSDARP00000036177 | ENSDARP00000116736 | Forkhead box O3A. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of bax and fas antigen expression, or by repression of Bcl-2 expression. | 0.765 |
foxo3a | usp7 | ENSDARP00000036177 | ENSDARP00000002502 | Forkhead box O3A. | Ubiquitin-specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. | 0.932 |
foxo3b | foxo3a | ENSDARP00000062981 | ENSDARP00000036177 | Forkhead box O3b. | Forkhead box O3A. | 0.907 |
foxo3b | mdm2 | ENSDARP00000062981 | ENSDARP00000072320 | Forkhead box O3b. | E3 ubiquitin-protein ligase Mdm2; E3 ubiquitin-protein ligase that mediates ubiquitination of p53/TP53, leading to its degradation by the proteasome. | 0.543 |
foxo3b | tp53 | ENSDARP00000062981 | ENSDARP00000116736 | Forkhead box O3b. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of bax and fas antigen expression, or by repression of Bcl-2 expression. | 0.548 |
foxo3b | usp7 | ENSDARP00000062981 | ENSDARP00000002502 | Forkhead box O3b. | Ubiquitin-specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. | 0.932 |
gmps | uhrf1 | ENSDARP00000097707 | ENSDARP00000135054 | Guanine monophosphate synthase. | E3 ubiquitin-protein ligase UHRF1; Multidomain protein that acts as a key epigenetic regulator by bridging DNA methylation and chromatin modification. Specifically recognizes and binds hemimethylated DNA at replication forks via its YDG domain and recruits dnmt1 methyltransferase to ensure faithful propagation of the DNA methylation patterns through DNA replication. In addition to its role in maintenance of DNA methylation, also plays a key role in chromatin modification: through its tudor-like regions and PHD-type zinc fingers, specifically recognizes and binds histone H3 trimethylate [...] | 0.510 |
gmps | usp7 | ENSDARP00000097707 | ENSDARP00000002502 | Guanine monophosphate synthase. | Ubiquitin-specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. | 0.971 |
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