STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nkain1Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1; Belongs to the NKAIN family. (207 aa)    
Predicted Functional Partners:
tmem169a
Transmembrane protein 169a.
      
 0.835
lpar2a
Lysophosphatidic acid receptor 2a; Belongs to the G-protein coupled receptor 1 family.
      
 0.805
slc10a4
Solute carrier family 10 member 4.
      
 0.744
lpar2b
Lysophosphatidic acid receptor 2b; Belongs to the G-protein coupled receptor 1 family.
      
 0.743
hcn3
Hyperpolarization-activated cyclic nucleotide-gated potassium channel 3.
   
  
 0.652
hcn4l
Hyperpolarization-activated cyclic nucleotide-gated potassium channel 4l.
   
  
 0.585
limch1b
LIM and calponin homology domains 1b.
      
 0.569
LOC100332538
Endothelin-converting enzyme-like 1.
      
 0.540
slc30a10
Solute carrier family 30 member 10.
      
 0.540
dlk2
Delta-like 2 homolog (Drosophila).
   
  
 0.434
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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