STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gorasp1aGolgi reassembly-stacking protein 1a. (438 aa)    
Predicted Functional Partners:
golga2
Cis-Golgi matrix protein GM130.
    
 0.967
blzf1
Basic leucine zipper nuclear factor 1.
   
 
 0.938
uso1
USO1 homolog, vesicle docking protein (Yeast).
   
 0.932
plk1
Serine/threonine-protein kinase PLK.
   
 0.827
cog2
Component of oligomeric golgi complex 2.
      
 0.813
bet1
Novel protein similar to vertebrate BET1 homolog (S. cerevisiae) (BET1).
   
 0.770
sec24b
SEC24 homolog B, COPII coat complex component.
   
 0.770
sec24a
SEC24 homolog A, COPII coat complex component.
   
 0.770
gosr1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 
 0.754
golga5
Golgin subfamily A member 5; Involved in maintaining Golgi structure. Stimulates the formation of Golgi stacks and ribbons. Involved in intra-Golgi retrograde transport (By similarity).
   
  
 0.753
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.