STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc16a12aSolute carrier family 16 member 12a. (617 aa)    
Predicted Functional Partners:
crygmx
Crystallin, gamma MX; Belongs to the beta/gamma-crystallin family.
      
 0.851
rnf10
Ring finger protein 10.
      
 0.851
grifin
Grifin; Binds lactose.
      
 0.745
cryba2b
Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family.
      
 0.745
mipb
Major intrinsic protein of lens fiber b; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  
 0.675
lim2.2
Lens intrinsic membrane protein 2.2.
      
 0.650
crygn1
Gamma-crystallin N-A; Crystallins are the dominant structural components of the vertebrate eye lens.
    
 
 0.645
crygmxl2
Crystallin, gamma MX,-like 2; Belongs to the beta/gamma-crystallin family.
      
 0.586
cryba1b
Crystallin, beta A1b; Belongs to the beta/gamma-crystallin family.
      
 0.562
tmod1
Tropomodulin 1.
      
 0.553
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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