STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgfr1op2FGFR1 oncogene partner 2 homolog. (215 aa)    
Predicted Functional Partners:
slmapa
Sarcolemma-associated protein a.
    
 
 0.856
strip1
Striatin-interacting protein 1 homolog; May play a role in the regulation of cell morphology and cytoskeletal organization. Required in the cortical actin filament dynamics and cell shape (By similarity).
    
 
 0.842
mob4
MOB1, Mps One Binder kinase activator-like 3 (Yeast).
    
 
 0.822
cttnbp2nlb
CTTNBP2 N-terminal-like b.
      
 0.805
E7F1V5_DANRE
Uncharacterized protein.
    
 
 0.793
strn
Striatin, calmodulin-binding protein.
    
 
 0.771
stard4
StAR-related lipid transfer (START) domain-containing 4.
      
 0.736
strip2
Striatin-interacting protein 2.
    
 
 0.727
pdcd10b
Programmed cell death protein 10-B; Promotes cell proliferation. Modulates apoptotic pathways. Increases mitogen-activated protein kinase activity. Important for cell migration, and for normal structure and assembly of the Golgi complex. Important for KDR/VEGFR2 signaling. Required for normal angiogenesis, vasculogenesis and hematopoiesis during embryonic development (By similarity). Required for normal cardiovascular development.
   
 
 0.720
slmapb
Sarcolemma-associated protein b.
    
 
 0.712
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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