STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpsm1bG protein-signaling modulator 1b. (634 aa)    
Predicted Functional Partners:
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.692
gnai3
Guanine nucleotide-binding protein (G protein), alpha-inhibiting activity polypeptide 3.
   
 0.687
gnai1
Guanine nucleotide-binding protein (G protein), alpha-inhibiting activity polypeptide 1.
   
 0.684
gnat2
Guanine nucleotide-binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.684
gnai2b
Guanine nucleotide-binding protein (G protein), alpha-inhibiting activity polypeptide 2b.
   
 0.684
whrna
Whirlin a.
    
 
 0.575
whrnb
Whirlin b.
    
 
 0.575
pip5k1aa
Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a.
   
 
 0.562
pip5k1bb
Phosphatidylinositol-4-phosphate 5-kinase, type I, beta b.
    
 
 0.559
pip5k1ab
Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b.
    
 
 0.559
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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