STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galnt6Polypeptide N-acetylgalactosaminyltransferase. (619 aa)    
Predicted Functional Partners:
fgf23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
     
 0.854
st6galnac1.2
Si:ch211-51n14.2; Belongs to the glycosyltransferase 29 family.
     
 0.810
clybl
Citrate lyase beta-like.
      
 0.743
c1galt1c1
C1GALT1-specific chaperone 1.
   
 
 0.697
A3KQK4_DANRE
Si:dkey-202e17.1.
   
 
 0.684
c1galt1b
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.
   
 
 0.675
c1galt1a
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.
     
 0.674
rtn4rl1b
Reticulon 4 receptor-like 1b.
      
 0.663
st6galnac1.1
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7A); Belongs to the glycosyltransferase 29 family.
     
 0.656
rab44
RAB44, member RAS oncogene family.
      
 0.645
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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