STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
memo1Protein MEMO1; May control cell migration by relaying extracellular chemotactic signals to the microtubule cytoskeleton. Mediator of ERBB2 signaling (By similarity); Belongs to the MEMO1 family. (297 aa)    
Predicted Functional Partners:
rpl32
Ribosomal protein L32.
 
      0.894
maco1a
Macoilin-1; May play a role in the regulation of neuronal activity. Belongs to the macoilin family.
   
  
 0.772
ypel5
Protein yippee-like; Belongs to the yippee family.
   
  
 0.737
erbb2
Receptor protein-tyrosine kinase.
   
 0.674
ammecr1
AMMECR nuclear protein 1.
  
    0.670
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid.
 
   
 0.588
fbxo42
F-box protein 42.
   
  
 0.551
nrg2b
Neuregulin 2b.
   
  0.518
nrg1
Neuregulin 1.
   
  0.518
ENSDARP00000086547
Receptor protein-tyrosine kinase.
    
  0.514
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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