STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wrnip1WRN helicase-interacting protein 1. (546 aa)    
Predicted Functional Partners:
wrn
WRN RecQ-like helicase.
  
 
 0.940
rad18
RAD18 E3 ubiquitin protein ligase.
   
 
 0.868
prr18
Proline-rich 18.
      
 0.851
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
   
 
 0.764
LOC100334178
Uncharacterized protein.
    
 
 0.747
fbxo18
F-box DNA helicase 1.
    
 
 0.705
recql4
RecQ helicase-like 4.
  
 
 0.696
blm
BLM RecQ-like helicase.
  
 
 0.696
recql5
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 
 0.675
mrps10
Probable 28S ribosomal protein S10, mitochondrial; Belongs to the universal ribosomal protein uS10 family.
  
  
 0.668
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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