Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
fgfr1opChemokine (C-C motif) receptor 6a. (511 aa)    
Predicted Functional Partners:
cep350
Centrosomal protein 350.
    
 
 0.981
cep19
Centrosomal protein of 19 kDa; Required for ciliation. Recruits the RABL2B GTPase to the ciliary base to initiate ciliation; Belongs to the CEP19 family.
    
 
 0.977
ppp2r3c
Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma; Possible role in the regulation of cell death.
    
 
 0.969
cep78
Centrosomal protein 78.
    
   0.928
rabl2
Novel protein similar to vertebrate RAB, member of RAS oncogene family-like 2B (RABL2B).
   
 
 0.888
mapre1b
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.870
mapre1a
Microtubule-associated protein, RP/EB family, member 1a.
    
 
 0.863
pacs1a
Phosphofurin acidic cluster sorting protein 1a.
    
   0.771
ENSDARP00000136103
Si:ch211-126j24.1.
    
   0.771
zmp:0000000755
Uncharacterized protein.
    
   0.771
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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