Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
crlf1bCytokine receptor-like factor 1b. (416 aa)    
Predicted Functional Partners:
crlf1a
Cytokine receptor-like factor 1.a.
  
  
 
0.901
prl
Prolactin.
    
 0.672
prl2
Prolactin 2.
    
 0.672
lepr
Leptin receptor.
     
 0.594
rex1bd
Required for excision 1-B domain-containing.
      
 0.517
gh1
Growth hormone 1.
   
 0.482
smtlb
Somatolactin beta.
   
 0.482
smtla
Somatolactin alpha.
   
 0.482
lepa
Putative leptin.
     
 0.473
psmd3
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 3.
     
  0.464
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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