STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
krt1-19dKeratin, type 1, gene 19d; Belongs to the intermediate filament family. (423 aa)    
Predicted Functional Partners:
iffo2a
Intermediate filament family orphan 2a; Belongs to the intermediate filament family.
      
 0.807
iffo1a
Intermediate filament family orphan 1a; Belongs to the intermediate filament family.
      
 0.807
iffo2b
Intermediate filament family orphan 2b; Belongs to the intermediate filament family.
      
 0.745
iffo1b
Intermediate filament family orphan 1b; Belongs to the intermediate filament family.
      
 0.742
zgc:158846
Zgc:158846; Belongs to the intermediate filament family.
  
0.713
fhdc4
FH2 domain-containing 4.
    
 
 0.675
ENSDARP00000138707
SERPIN domain-containing protein; Belongs to the serpin family.
      
 0.664
slc38a11
Putative sodium-coupled neutral amino acid transporter 11; Putative sodium-dependent amino acid/proton antiporter. Belongs to the amino acid/polyamine transporter 2 family.
      
 0.660
mate4
Multidrug and toxin extrusion protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
      
 0.646
nitr11a
IGv domain-containing protein.
      
 0.644
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.