STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap161Cilia- and flagella-associated protein 161; May play a role in motile cilia function, possibly by acting on dynein arm assembly. (301 aa)    
Predicted Functional Partners:
pebp4
Phosphatidylethanolamine binding protein 4.
   
  
 0.939
cfap52
Cilia and flagella-associated protein 52.
   
 
 0.911
efhc2
EF-hand domain-containing family member C2.
   
 
 0.874
ccdc146
Coiled-coil domain-containing 146.
   
 
 0.868
mns1
Meiosis-specific nuclear structural protein 1.
   
 
 0.862
rsph14
Radial spoke head 14 homolog.
   
  
 0.858
dlec1
DLEC1 cilia and flagella-associated protein.
   
 
 0.830
saxo2
Stabilizer of axonemal microtubules 2.
   
 
 0.825
cfap126
Protein Flattop; Acts as a regulator of cilium basal body docking and positioning in mono- and multiciliated cells. Belongs to the Flattop family.
   
 
 0.825
lrrc34
Leucine-rich repeat-containing 34.
   
  
 0.816
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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