STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc127bCoiled-coil domain-containing 127b. (266 aa)    
Predicted Functional Partners:
ap1ar
Adaptor-related protein complex 1-associated regulatory protein.
    
   0.890
grpel2
GrpE-like 2, mitochondrial; Belongs to the GrpE family.
      
 0.836
dnlz
DNL-type zinc finger protein; May function as a co-chaperone towards HSPA9/mortalin which, by itself, is prone to self-aggregation.
      
 0.800
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
      
 0.720
mto1
Mitochondrial tRNA translation optimization 1.
      
 0.694
asb7
Ankyrin repeat and SOCS box-containing 7.
      
 0.648
si:dkey-21c1.1
Si:dkey-21c1.1.
      
 0.639
supt7l
Suppressor of Ty 7 (S. cerevisiae)-like.
   
  
 0.637
tada2b
Transcriptional adapter 2-beta; Transcriptional coactivator.
      
 0.631
rgs11
Regulator of G protein-signaling 11.
    
   0.594
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.