STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnase1l4.2Deoxyribonuclease; Belongs to the DNase I family. (282 aa)    
Predicted Functional Partners:
tnfb
Tumor necrosis factor b (TNF superfamily, member 2).
    
 
 0.798
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 
 0.702
tbk1
TANK-binding kinase 1.
   
 
 0.702
tradd
Tumor necrosis factor receptor type 1-associated DEATH domain protein; Adapter molecule for tnfrsf1a that specifically associates with the cytoplasmic domain of activated tnfrsf1a mediating its interaction with fadd.
      
 0.429
traf2b
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 
 0.428
unm_sa808
Un-named sa808.
    
 
 0.426
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.426
traf2a
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.426
traf1
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.426
traf5
Tnf receptor-associated factor 5.
    
 
 0.426
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.