STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wnt11f2Protein Wnt-11; Ligand for members of the frizzled family of seven transmembrane receptors. May play a role in the formation of dermal structure, both limb and feather buds. Is likely to signal over only few cell diameters (By similarity); Belongs to the Wnt family. (353 aa)    
Predicted Functional Partners:
ryk
Receptor-like tyrosine kinase.
    
 
 0.989
fzd6
Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.963
fzd7a
Frizzled class receptor 7a; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 0.960
fzd2
Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 0.958
fzd3a
Transmembrane receptor frizzled-3; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.952
lrp5
Low density lipoprotein receptor-related protein 5.
    
 0.950
fzd5
Frizzled class receptor 5; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.943
fzd4
Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 0.941
sfrp1a
Secreted frizzled-related protein 1a.
    
 0.929
sfrp5
Secreted frizzled-related protein 5.
    
 0.929
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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