Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mylipaE3 ubiquitin-protein ligase MYLIP-A; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of myosin regulatory light chain (MRLC) (By similarity). Regulates cell movements during gastrulation by acting downstream of fz7 to antagonize the frizzled-signaling pathway. (472 aa)    
Predicted Functional Partners:
vldlr
Very low density lipoprotein receptor.
   
 0.848
lrp8
Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor.
    
 0.843
ldlra
Low density lipoprotein receptor a.
    
 0.819
ldlrb
Low density lipoprotein receptor b.
    
 0.819
mtus1a
Microtubule-associated tumor suppressor 1 homolog A; May inhibit cell proliferation.
   
 
 0.797
cnpy2
Canopy FGF-signaling regulator 2.
    
 
 0.778
stmnd1
Stathmin domain-containing 1.
      
 0.740
ccnb2
Cyclin B2; Belongs to the cyclin family.
   
 
 0.700
cnpy1
Protein canopy-1; Involved in the maintenance of the midbrain-hindbrain boundary (MHB) organizer. Contributes to a positive-feedback loop of FGF signaling in the MHB, enabling the MHB to exert its role as an organizer for the tectal and cerebellar development.
    
 
 0.665
tatdn2
TatD DNase domain-containing 2.
      
 0.647
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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