STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
creb3l1cAMP-responsive element-binding protein 3-like 1. (526 aa)    
Predicted Functional Partners:
tmem38b
Trimeric intracellular cation channel type B; Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores.
      
 0.852
mbtps2
Membrane-bound transcription factor peptidase, site 2.
      
 0.842
p3h1
Prolyl 3-hydroxylase 1.
   
  
 0.816
crtap
Cartilage-associated protein.
      
 0.815
sec24d
SEC24 homolog D, COPII coat complex component.
   
  
 0.809
fkbp10b
Peptidylprolyl isomerase.
   
  
 0.752
ifitm5
Interferon-induced transmembrane protein 5.
   
  
 0.744
serpinf1
Zgc:92072; Belongs to the serpin family.
      
 0.742
p4hb
Protein disulfide-isomerase.
   
  
 0.672
col1a1a
Collagen, type I, alpha 1a.
      
 0.662
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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