Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bend3 | ercc6l | ENSDARP00000120361 | ENSDARP00000012447 | BEN domain-containing 3. | DNA excision repair protein ERCC-6-like; DNA helicase that acts as an essential component of the spindle assembly checkpoint. Contributes to the mitotic checkpoint by recruiting MAD2 to kinetochores and monitoring tension on centromeric chromatin. Acts as a tension sensor that associates with catenated DNA which is stretched under tension until it is resolved during anaphase. Functions as ATP-dependent DNA translocase. Can promote Holliday junction branch migration (in vitro). | 0.809 |
cdc20 | cenpi | ENSDARP00000140575 | ENSDARP00000068927 | Cell division cycle 20 homolog. | Centromere protein I. | 0.814 |
cdc20 | ercc6l | ENSDARP00000140575 | ENSDARP00000012447 | Cell division cycle 20 homolog. | DNA excision repair protein ERCC-6-like; DNA helicase that acts as an essential component of the spindle assembly checkpoint. Contributes to the mitotic checkpoint by recruiting MAD2 to kinetochores and monitoring tension on centromeric chromatin. Acts as a tension sensor that associates with catenated DNA which is stretched under tension until it is resolved during anaphase. Functions as ATP-dependent DNA translocase. Can promote Holliday junction branch migration (in vitro). | 0.882 |
cdc20 | exo1 | ENSDARP00000140575 | ENSDARP00000073846 | Cell division cycle 20 homolog. | Exonuclease 1; 5'->3' double-stranded DNA exonuclease which may also contain a cryptic 3'->5' double-stranded DNA exonuclease activity. Also exhibits endonuclease activity against 5'-overhanging flap structures similar to those generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Required for DNA mismatch repair (MMR) (By similarity). | 0.651 |
cdc20 | mad2l1 | ENSDARP00000140575 | ENSDARP00000003616 | Cell division cycle 20 homolog. | MAD2 mitotic arrest deficient-like 1 (yeast). | 0.996 |
cdc20 | mis12 | ENSDARP00000140575 | ENSDARP00000032207 | Cell division cycle 20 homolog. | MIS12 kinetochore complex component. | 0.630 |
cdc20 | nudc | ENSDARP00000140575 | ENSDARP00000136053 | Cell division cycle 20 homolog. | NudC nuclear distribution protein. | 0.813 |
cdc20 | plk1 | ENSDARP00000140575 | ENSDARP00000075786 | Cell division cycle 20 homolog. | Serine/threonine-protein kinase PLK. | 0.993 |
cdc20 | ube2d1b | ENSDARP00000140575 | ENSDARP00000033537 | Cell division cycle 20 homolog. | Ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. | 0.600 |
cenpi | cdc20 | ENSDARP00000068927 | ENSDARP00000140575 | Centromere protein I. | Cell division cycle 20 homolog. | 0.814 |
cenpi | ercc6l | ENSDARP00000068927 | ENSDARP00000012447 | Centromere protein I. | DNA excision repair protein ERCC-6-like; DNA helicase that acts as an essential component of the spindle assembly checkpoint. Contributes to the mitotic checkpoint by recruiting MAD2 to kinetochores and monitoring tension on centromeric chromatin. Acts as a tension sensor that associates with catenated DNA which is stretched under tension until it is resolved during anaphase. Functions as ATP-dependent DNA translocase. Can promote Holliday junction branch migration (in vitro). | 0.856 |
cenpi | exo1 | ENSDARP00000068927 | ENSDARP00000073846 | Centromere protein I. | Exonuclease 1; 5'->3' double-stranded DNA exonuclease which may also contain a cryptic 3'->5' double-stranded DNA exonuclease activity. Also exhibits endonuclease activity against 5'-overhanging flap structures similar to those generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Required for DNA mismatch repair (MMR) (By similarity). | 0.518 |
cenpi | mad2l1 | ENSDARP00000068927 | ENSDARP00000003616 | Centromere protein I. | MAD2 mitotic arrest deficient-like 1 (yeast). | 0.821 |
cenpi | mis12 | ENSDARP00000068927 | ENSDARP00000032207 | Centromere protein I. | MIS12 kinetochore complex component. | 0.486 |
cenpi | nudc | ENSDARP00000068927 | ENSDARP00000136053 | Centromere protein I. | NudC nuclear distribution protein. | 0.518 |
cenpi | plk1 | ENSDARP00000068927 | ENSDARP00000075786 | Centromere protein I. | Serine/threonine-protein kinase PLK. | 0.716 |
ercc6l | bend3 | ENSDARP00000012447 | ENSDARP00000120361 | DNA excision repair protein ERCC-6-like; DNA helicase that acts as an essential component of the spindle assembly checkpoint. Contributes to the mitotic checkpoint by recruiting MAD2 to kinetochores and monitoring tension on centromeric chromatin. Acts as a tension sensor that associates with catenated DNA which is stretched under tension until it is resolved during anaphase. Functions as ATP-dependent DNA translocase. Can promote Holliday junction branch migration (in vitro). | BEN domain-containing 3. | 0.809 |
ercc6l | cdc20 | ENSDARP00000012447 | ENSDARP00000140575 | DNA excision repair protein ERCC-6-like; DNA helicase that acts as an essential component of the spindle assembly checkpoint. Contributes to the mitotic checkpoint by recruiting MAD2 to kinetochores and monitoring tension on centromeric chromatin. Acts as a tension sensor that associates with catenated DNA which is stretched under tension until it is resolved during anaphase. Functions as ATP-dependent DNA translocase. Can promote Holliday junction branch migration (in vitro). | Cell division cycle 20 homolog. | 0.882 |
ercc6l | cenpi | ENSDARP00000012447 | ENSDARP00000068927 | DNA excision repair protein ERCC-6-like; DNA helicase that acts as an essential component of the spindle assembly checkpoint. Contributes to the mitotic checkpoint by recruiting MAD2 to kinetochores and monitoring tension on centromeric chromatin. Acts as a tension sensor that associates with catenated DNA which is stretched under tension until it is resolved during anaphase. Functions as ATP-dependent DNA translocase. Can promote Holliday junction branch migration (in vitro). | Centromere protein I. | 0.856 |
ercc6l | exo1 | ENSDARP00000012447 | ENSDARP00000073846 | DNA excision repair protein ERCC-6-like; DNA helicase that acts as an essential component of the spindle assembly checkpoint. Contributes to the mitotic checkpoint by recruiting MAD2 to kinetochores and monitoring tension on centromeric chromatin. Acts as a tension sensor that associates with catenated DNA which is stretched under tension until it is resolved during anaphase. Functions as ATP-dependent DNA translocase. Can promote Holliday junction branch migration (in vitro). | Exonuclease 1; 5'->3' double-stranded DNA exonuclease which may also contain a cryptic 3'->5' double-stranded DNA exonuclease activity. Also exhibits endonuclease activity against 5'-overhanging flap structures similar to those generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Required for DNA mismatch repair (MMR) (By similarity). | 0.872 |
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