STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdia2Protein disulfide-isomerase. (555 aa)    
Predicted Functional Partners:
ppp1r27b
Protein phosphatase 1, regulatory subunit 27b.
    
 
 0.900
hspa5
Immunoglobulin binding protein; Belongs to the heat shock protein 70 family.
   
 
 0.847
calr3b
Calreticulin.
   
 
 0.765
calr
Calreticulin.
   
 
 0.762
calr3a
Calreticulin.
   
 
 0.731
hsp90b1
Heat shock protein 90, beta (Grp94), member 1.
   
 
 0.708
ankrd45
Ankyrin repeat domain 45.
   
 
 0.675
stard14
START domain containing 10.
   
  
 0.663
stard10
StAR-related lipid transfer (START) domain-containing 10.
   
  
 0.661
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
  
 
0.655
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.