Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
klf5aProgesterone immunomodulatory-binding factor 1. (429 aa)    
Predicted Functional Partners:
mboat1
Membrane-bound O-acyltransferase domain-containing 1; Belongs to the membrane-bound acyltransferase family.
    
 0.754
apodb
Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family.
      
 0.720
ep300b
E1A-binding protein p300 b.
    
 0.691
ep300a
E1A-binding protein p300 a.
    
 0.691
pibf1
Progesterone immunomodulatory-binding factor 1.
 
 
 
 0.682
wwp2
E3 ubiquitin-protein ligase.
    
 
 0.635
LOC103909792
E3 ubiquitin-protein ligase.
    
 
 0.635
tead3b
TEA domain family member 3 b.
    
 0.616
acsf2
Medium-chain acyl-CoA ligase ACSF2, mitochondrial; Acyl-CoA synthases catalyze the initial reaction in fatty acid metabolism, by forming a thioester with CoA. Has some preference toward medium-chain substrates. Plays a role in adipocyte differentiation; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 
 0.599
il20ra
Interleukin 20 receptor, alpha.
      
 0.572
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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