Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F1QLQ2_DANRESi:ch73-160i9.3. (355 aa)    
Predicted Functional Partners:
bin2b
Bridging integrator 2b.
      
 0.780
kif20bb
Kinesin family member 20Bb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.720
kif5ba
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.669
pcdh2ab10
Protocadherin 2 alpha b 10.
      
 0.565
kif5bb
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.555
itgbl1
Integrin, beta-like 1.
      
 0.466
F1R6R2_DANRE
Si:ch211-270n8.1.
      
 0.443
kifc1
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.443
fas
Fas cell surface death receptor.
     
 0.438
cela1.1
Chymotrypsin-like elastase family member 1, tandem duplicate 1; Belongs to the peptidase S1 family.
    
 0.402
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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