Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
aar2AAR2-splicing factor. (384 aa)    
Predicted Functional Partners:
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
    
 
 0.995
eftud2
Elongation factor Tu GTP-binding domain-containing 2.
   
 
 0.994
prpf8
Pre-mRNA-processing factor 8.
    
 
 0.993
znhit2
Zinc finger, HIT-type-containing 2.
   
 
 0.990
tssc4
Protein TSSC4; Belongs to the TSSC4 family.
    
 
 0.981
ddx23
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.
    
 
 0.980
eapp
E2f-associated phosphoprotein.
    
 
 0.977
ecd
Ecdysoneless homolog (Drosophila).
    
 
 0.977
cd2bp2
CD2 (cytoplasmic tail)-binding protein 2.
   
 
 0.966
snrnp40
Small nuclear ribonucleoprotein 40 (U5).
    
 
 0.965
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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