Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zgc:77158Zgc:77158. (551 aa)    
Predicted Functional Partners:
zgc:162160
Zgc:162160.
      
 0.817
slc35f4
Solute carrier family 35 member F4.
   
  
 0.780
phax
Phosphorylated adaptor for RNA export.
    
   0.723
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
      
 0.635
KCNJ15
Potassium voltage-gated channel subfamily J member 15.
      
 0.594
tmem268
Uncharacterized protein.
      
 0.594
tmem266
Transmembrane protein 266.
      
 0.587
slc20a1b
Sodium-dependent phosphate transporter 1-B; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport; Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
      
 0.582
me1
Malic enzyme.
      
 0.570
kcnj5
Potassium inwardly rectifying channel subfamily J member 5.
      
 0.502
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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