Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
slc35e1Solute carrier family 35, member E1. (375 aa)    
Predicted Functional Partners:
tmem165
GDT1 family protein.
   
   0.784
plpp5
Phospholipid phosphatase 5.
   
  
 0.776
PLBD2
Phospholipase B-like; Putative phospholipase.
      
 0.760
sh2d3a
SH2 domain containing 3A.
    
 
 0.739
vwa5b2
Von Willebrand factor A domain-containing 5B2.
      
 0.736
SLC35G1
Si:ch211-197g18.2.
      
 0.730
nt5dc1
5'-nucleotidase domain-containing 1.
      
 0.719
cramp1
Cramped chromatin regulator homolog 1.
      
 0.719
sugct
Succinyl-CoA:glutarate-CoA transferase.
      
 0.719
nr2c2ap
Nuclear receptor 2C2-associated protein; May act as a repressor of nr2c2-mediated transactivation by suppressing the binding between nr2c2 and its response element in target genes; Belongs to the NR2C2AP family.
      
 0.705
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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