STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ghraGrowth hormone receptor a. (570 aa)    
Predicted Functional Partners:
gh1
Growth hormone 1.
    
 0.983
smtla
Somatolactin alpha.
    
 0.975
igf1
Insulin-like growth factor 1b.
      
 0.807
socs2
Suppressor of cytokine signaling 2.
   
 
 0.793
igfbp5a
Insulin-like growth factor-binding protein 5a.
   
  
 0.700
igfbp3
Insulin-like growth factor-binding protein 3.
      
 0.693
ghrh
Growth hormone-releasing hormone.
      
 0.690
nim1k
NIM1 serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
  
 0.672
igf2a
Insulin-like growth factor 2a.
   
  
 0.645
ghrb
Growth hormone receptor b.
  
 
0.644
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.