STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcc9ATP-binding cassette, sub-family C (CFTR/MRP), member 9. (1558 aa)    
Predicted Functional Partners:
kcnj8
Potassium inwardly-rectifying channel, subfamily J, member 8.
 
 
 0.995
kcnj11
Potassium inwardly-rectifying channel, subfamily J, member 11.
 
 
 0.991
kcnj11l
Potassium inwardly-rectifying channel, subfamily J, member 11, like.
 
 
 
 0.811
abca5
ATP-binding cassette, sub-family A (ABC1), member 5.
   
 
 0.682
kcnj11l-2
Potassium inwardly rectifying channel subfamily J member 11,-like.
      
 0.665
abce1
ATP-binding cassette, sub-family E (OABP), member 1.
      
 0.613
mybpc3
Myosin-binding protein C3.
   
 
 0.606
abca12
ATP-binding cassette, sub-family A (ABC1), member 12.
   
 
 0.604
abca2
ATP-binding cassette, sub-family A (ABC1), member 2.
   
 
 0.595
abcg4a
ATP-binding cassette, sub-family G (WHITE), member 4a.
   
 
 0.553
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.