STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adgrl4Adhesion G protein-coupled receptor L4; Orphan receptor that plays a role in vessel formation. Belongs to the G-protein coupled receptor 2 family. Adhesion G-protein coupled receptor (ADGR) subfamily. (735 aa)    
Predicted Functional Partners:
miga1
Mitoguardin 1; Regulator of mitochondrial fusion: acts by forming homo- and heterodimers at the mitochondrial outer membrane and facilitating the formation of pld6/MitoPLD dimers. May act by regulating phospholipid metabolism via pld6/MitoPLD.
      
 0.684
zzz3
Zinc finger, ZZ-type-containing 3.
      
 0.640
ptgfr
Prostaglandin F receptor (FP); Belongs to the G-protein coupled receptor 1 family.
      
 0.592
clec14a
C-type lectin domain-containing 14A.
   
  
 0.565
hsd17b14
Hydroxysteroid (17-beta) dehydrogenase 14.
      
 0.563
ENSDARP00000147981
SUEL-type lectin domain-containing protein.
 
 
  
 0.557
ak5
Adenylate kinase 5; Belongs to the adenylate kinase family.
      
 0.528
sox18
SRY-box transcription factor 18.
   
  
 0.509
mmrn2b
Multimerin 2b.
   
  
 0.488
phactr1
Phosphatase and actin regulator.
   
  
 0.482
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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