Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
itln3Intelectin 3. (314 aa)    
Predicted Functional Partners:
lrrc66
Leucine-rich repeat-containing 66.
      
 0.689
jac4
Jacalin 4.
      
 0.661
LOC564481
Hypothetical protein LOC564481.
      
 0.661
ENSDARP00000142590
Si:dkeyp-32g11.8.
      
 0.661
LOC564660
Hypothetical protein LOC564660.
      
 0.661
lyz
Lysozyme; Belongs to the glycosyl hydrolase 22 family.
      
 0.601
lectin
Lectin.
      
 0.594
ly6m2
Lymphocyte antigen 6 family member M2.
      
 0.594
endog
Endonuclease.
    
   0.591
ENSDARP00000148627
Si:dkey-202l22.6.
      
 0.590
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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