Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| alyref | gle1 | ENSDARP00000139993 | ENSDARP00000110644 | Aly/REF export factor. | Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity). | 0.757 |
| alyref | nup153 | ENSDARP00000139993 | ENSDARP00000141671 | Aly/REF export factor. | Nucleoporin 153. | 0.718 |
| alyref | nup155 | ENSDARP00000139993 | ENSDARP00000007708 | Aly/REF export factor. | Nucleoporin 155. | 0.655 |
| alyref | nup214 | ENSDARP00000139993 | ENSDARP00000102382 | Aly/REF export factor. | Nucleoporin 214. | 0.697 |
| alyref | nup88 | ENSDARP00000139993 | ENSDARP00000025718 | Aly/REF export factor. | Nucleoporin 88; Component of the nuclear pore complex. | 0.538 |
| alyref | nup93 | ENSDARP00000139993 | ENSDARP00000013627 | Aly/REF export factor. | Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance. | 0.625 |
| alyref | nup98 | ENSDARP00000139993 | ENSDARP00000110413 | Aly/REF export factor. | Nucleoporin 98. | 0.708 |
| alyref | nxf1 | ENSDARP00000139993 | ENSDARP00000071848 | Aly/REF export factor. | Nuclear RNA export factor 1. | 0.998 |
| alyref | rae1 | ENSDARP00000139993 | ENSDARP00000015105 | Aly/REF export factor. | mRNA export factor; Plays a role in mitotic bipolar spindle formation. Binds mRNA. May function in nucleocytoplasmic transport and in directly or indirectly attaching cytoplasmic mRNPs to the cytoskeleton. Belongs to the WD repeat rae1 family. | 0.951 |
| alyref | zgc:153681 | ENSDARP00000139993 | ENSDARP00000109457 | Aly/REF export factor. | Zgc:153681. | 0.992 |
| gle1 | alyref | ENSDARP00000110644 | ENSDARP00000139993 | Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity). | Aly/REF export factor. | 0.757 |
| gle1 | nup153 | ENSDARP00000110644 | ENSDARP00000141671 | Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity). | Nucleoporin 153. | 0.953 |
| gle1 | nup155 | ENSDARP00000110644 | ENSDARP00000007708 | Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity). | Nucleoporin 155. | 0.988 |
| gle1 | nup214 | ENSDARP00000110644 | ENSDARP00000102382 | Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity). | Nucleoporin 214. | 0.995 |
| gle1 | nup88 | ENSDARP00000110644 | ENSDARP00000025718 | Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity). | Nucleoporin 88; Component of the nuclear pore complex. | 0.944 |
| gle1 | nup93 | ENSDARP00000110644 | ENSDARP00000013627 | Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity). | Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance. | 0.895 |
| gle1 | nup98 | ENSDARP00000110644 | ENSDARP00000110413 | Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity). | Nucleoporin 98. | 0.908 |
| gle1 | nxf1 | ENSDARP00000110644 | ENSDARP00000071848 | Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity). | Nuclear RNA export factor 1. | 0.891 |
| gle1 | rae1 | ENSDARP00000110644 | ENSDARP00000015105 | Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity). | mRNA export factor; Plays a role in mitotic bipolar spindle formation. Binds mRNA. May function in nucleocytoplasmic transport and in directly or indirectly attaching cytoplasmic mRNPs to the cytoskeleton. Belongs to the WD repeat rae1 family. | 0.998 |
| gle1 | zgc:153681 | ENSDARP00000110644 | ENSDARP00000109457 | Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity). | Zgc:153681. | 0.788 |
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