STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plvapbPlasmalemma vesicle-associated protein b. (409 aa)    
Predicted Functional Partners:
ano8b
Anoctamin.
 
    
 0.950
ano8a
Anoctamin.
 
    
 0.950
znfl2a
Zinc finger-like gene 2a.
   
 
 0.840
nr2f6b
Nuclear receptor subfamily 2, group F, member 6b.
    
 
 0.707
cldng
Claudin-like protein ZF-A9; Component of tight junction (TJ) strands; Belongs to the claudin family.
      
 0.649
bola1
BolA family member 1; Belongs to the BolA/IbaG family.
    
 
 0.623
cpox
Coproporphyrinogen oxidase.
    
 
 0.542
slc2a1a
Facilitated glucose transporter 1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 
 0.497
nr2f1b
Nuclear receptor subfamily 2 group F member 1-B; Putative transcription factor that is required in photoreceptor cells precursors during eye development; Belongs to the nuclear hormone receptor family. NR2 subfamily.
    
 
 0.490
cahz
Carbonic anhydrase; Reversible hydration of carbon dioxide.
   
  
 0.481
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.