Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bud31 | crnkl1 | ENSDARP00000015461 | ENSDARP00000100660 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | Crooked neck pre-mRNA-splicing factor 1. | 0.999 |
bud31 | cwc15 | ENSDARP00000015461 | ENSDARP00000022647 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | Protein CWC15 homolog; Involved in pre-mRNA splicing as component of the spliceosome. | 0.997 |
bud31 | cwc22 | ENSDARP00000015461 | ENSDARP00000013971 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | Pre-mRNA-splicing factor CWC22 homolog; Required for pre-mRNA splicing as component of the spliceosome. Promotes exon-junction complex (EJC) assembly. | 0.997 |
bud31 | eftud2 | ENSDARP00000015461 | ENSDARP00000028033 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | Elongation factor Tu GTP-binding domain-containing 2. | 0.996 |
bud31 | isy1 | ENSDARP00000015461 | ENSDARP00000087580 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | ISY1-splicing factor homolog. | 0.999 |
bud31 | plrg1 | ENSDARP00000015461 | ENSDARP00000054234 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | Pleiotropic regulator 1. | 0.996 |
bud31 | rbm22 | ENSDARP00000015461 | ENSDARP00000004055 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | Pre-mRNA-splicing factor RBM22; Required for pre-mRNA splicing as component of the activated spliceosome. Involved in the first step of pre-mRNA splicing. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre-mRNA intron near the 5' splice site during the activation and catalytic phases of the spliceosome cycle (By similarity). Required for normal early embryogenesis. | 0.999 |
bud31 | snw1 | ENSDARP00000015461 | ENSDARP00000138373 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | SNW domain-containing 1. | 0.999 |
bud31 | xab2 | ENSDARP00000015461 | ENSDARP00000010070 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | Similar to Xab2 protein. | 0.999 |
bud31 | yju2 | ENSDARP00000015461 | ENSDARP00000035484 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | Splicing factor YJU2; Part of the spliceosome which catalyzes two sequential transesterification reactions, first the excision of the non-coding intron from pre-mRNA and then the ligation of the coding exons to form the mature mRNA. Plays a role in stabilizing the structure of the spliceosome catalytic core and docking of the branch helix into the active site, producing 5'-exon and lariat intron-3'-intermediates (By similarity). May protect cells from TP53-dependent apoptosis upon dsDNA break damage through association with PRP19-CD5L complex ; Belongs to the CWC16 family. YJU2 subfamily. | 0.996 |
crnkl1 | bud31 | ENSDARP00000100660 | ENSDARP00000015461 | Crooked neck pre-mRNA-splicing factor 1. | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | 0.999 |
crnkl1 | cwc15 | ENSDARP00000100660 | ENSDARP00000022647 | Crooked neck pre-mRNA-splicing factor 1. | Protein CWC15 homolog; Involved in pre-mRNA splicing as component of the spliceosome. | 0.997 |
crnkl1 | cwc22 | ENSDARP00000100660 | ENSDARP00000013971 | Crooked neck pre-mRNA-splicing factor 1. | Pre-mRNA-splicing factor CWC22 homolog; Required for pre-mRNA splicing as component of the spliceosome. Promotes exon-junction complex (EJC) assembly. | 0.991 |
crnkl1 | eftud2 | ENSDARP00000100660 | ENSDARP00000028033 | Crooked neck pre-mRNA-splicing factor 1. | Elongation factor Tu GTP-binding domain-containing 2. | 0.998 |
crnkl1 | isy1 | ENSDARP00000100660 | ENSDARP00000087580 | Crooked neck pre-mRNA-splicing factor 1. | ISY1-splicing factor homolog. | 0.999 |
crnkl1 | plrg1 | ENSDARP00000100660 | ENSDARP00000054234 | Crooked neck pre-mRNA-splicing factor 1. | Pleiotropic regulator 1. | 0.998 |
crnkl1 | rbm22 | ENSDARP00000100660 | ENSDARP00000004055 | Crooked neck pre-mRNA-splicing factor 1. | Pre-mRNA-splicing factor RBM22; Required for pre-mRNA splicing as component of the activated spliceosome. Involved in the first step of pre-mRNA splicing. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre-mRNA intron near the 5' splice site during the activation and catalytic phases of the spliceosome cycle (By similarity). Required for normal early embryogenesis. | 0.999 |
crnkl1 | snw1 | ENSDARP00000100660 | ENSDARP00000138373 | Crooked neck pre-mRNA-splicing factor 1. | SNW domain-containing 1. | 0.999 |
crnkl1 | xab2 | ENSDARP00000100660 | ENSDARP00000010070 | Crooked neck pre-mRNA-splicing factor 1. | Similar to Xab2 protein. | 0.999 |
crnkl1 | yju2 | ENSDARP00000100660 | ENSDARP00000035484 | Crooked neck pre-mRNA-splicing factor 1. | Splicing factor YJU2; Part of the spliceosome which catalyzes two sequential transesterification reactions, first the excision of the non-coding intron from pre-mRNA and then the ligation of the coding exons to form the mature mRNA. Plays a role in stabilizing the structure of the spliceosome catalytic core and docking of the branch helix into the active site, producing 5'-exon and lariat intron-3'-intermediates (By similarity). May protect cells from TP53-dependent apoptosis upon dsDNA break damage through association with PRP19-CD5L complex ; Belongs to the CWC16 family. YJU2 subfamily. | 0.994 |
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