STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mynnMyoneurin. (808 aa)    
Predicted Functional Partners:
rhpn2
Rhophilin-2; Binds specifically to GTP-Rho.
   
 
 0.842
dusp10
Dual-specificity phosphatase 10.
   
 
 0.753
ppm1bb
Protein phosphatase 1A, magnesium dependent, alpha isoform.
      
 0.742
glt1d1
Glycosyltransferase 1 domain-containing 1.
      
 0.719
eif3ha
Eukaryotic translation initiation factor 3 subunit H-A; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
      
 0.670
lama5
Laminin, alpha 5.
   
 
 0.661
TMEM132D
Transmembrane protein 132D.
      
 0.582
slc15a4
Solute carrier family 15 member 4.
      
 0.570
TMEM132C
Si:dkey-215k6.1.
      
 0.561
huwe1
HECT, UBA and WWE domain-containing E3 ubiquitin protein ligase 1.
    
   0.482
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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