Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rab11alRAB11a, member RAS oncogene family,-like. (216 aa)    
Predicted Functional Partners:
rab11fip1a
RAB11 family-interacting protein 1 (class I) a.
    
 0.995
rab11fip1b
RAB11 family-interacting protein 1 (class I) b.
    
 0.981
rab11fip2
RAB11 family-interacting protein 2 (class I).
    
 0.976
LOC570939
Uncharacterized protein.
    
 0.968
rab11fip5a
RAB11 family-interacting protein 5a (class I).
    
 0.952
rab11a
Novel protein similar to vertebrate Ras family.
     
  0.938
rab11fip4b
Rab11 family-interacting protein 4B; Acts as a regulator of endocytic traffic by participating in membrane delivery. Required for the abcission step in cytokinesis, possibly by acting as an 'address tag' delivering recycling endosome membranes to the cleavage furrow during late cytokinesis (By similarity).
    
 
 0.919
rab11ba
RAB11B, member RAS oncogene family, a.
     
  0.871
rab11bb
RAB11B, member RAS oncogene family, b.
     
  0.871
kif20bb
Kinesin family member 20Bb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.727
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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