STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unm_sa808Un-named sa808. (281 aa)    
Predicted Functional Partners:
traf5
Tnf receptor-associated factor 5.
 
      0.896
tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
    
 
 0.699
tnfb
Tumor necrosis factor b (TNF superfamily, member 2).
   
 
 0.673
tradd
Tumor necrosis factor receptor type 1-associated DEATH domain protein; Adapter molecule for tnfrsf1a that specifically associates with the cytoplasmic domain of activated tnfrsf1a mediating its interaction with fadd.
    
 
 0.642
tnfrsf1b
Tumor necrosis factor receptor superfamily, member 1B.
   
 
 0.618
traf6
TNF receptor-associated factor 6; E3 ubiquitin-protein ligase that mediates ubiquitination of proteins. Adapter protein that seems to play a role in signal transduction.
   
 
0.606
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 
 0.605
tbk1
TANK-binding kinase 1.
   
 
 0.605
tank
TRAF family member-associated NFKB activator.
    
 
 0.583
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
   
 
 0.581
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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