STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc5gbDnaJ (Hsp40) homolog, subfamily C, member 5 gamma b. (211 aa)    
Predicted Functional Partners:
dnajc14
DnaJ (Hsp40) homolog, subfamily C, member 14.
      
 0.807
tfip11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events.
    
 
 0.772
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.771
dnajc30b
DnaJ (Hsp40) homolog, subfamily C, member 30b.
    
 
 0.768
dnajc4
DnaJ (Hsp40) homolog, subfamily C, member 4.
    
 
 0.764
dnajc27
DnaJ homolog subfamily C member 27; GTPase possibly involved in regulation of the MEK/ERK pathway; Belongs to the small GTPase superfamily. Rab family.
   
 
 0.759
dnajc28
DnaJ (Hsp40) homolog, subfamily C, member 28.
      
 0.745
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
 
 0.744
crnkl1
Crooked neck pre-mRNA-splicing factor 1.
    
 
 0.736
dnajc22
DnaJ (Hsp40) homolog, subfamily C, member 22.
    
 
 0.732
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.