Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zgc:92907Zgc:92907. (164 aa)    
Predicted Functional Partners:
alg14
ALG14 UDP-N-acetylglucosaminyltransferase subunit.
   
 0.999
alg13
ALG13 UDP-N-acetylglucosaminyltransferase subunit.
 
   
  0.990
alg1
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.
  
 
 0.989
dpagt1
Dpagt1 protein.
   
 0.989
otud4
OTU deubiquitinase 4.
     
  0.867
il2rb
Interleukin 2 receptor, beta.
   
 0.836
il15l
Interleukin; Belongs to the IL-15/IL-21 family.
   
 0.807
il15ra
Interleukin 15 receptor subunit alpha.
   
 0.738
rraga
Ras-related GTP-binding A.
    
 0.738
alg11
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily.
    
 0.706
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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