Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
nutf2lNuclear transport factor 2,-like. (128 aa)    
Predicted Functional Partners:
nxt2
Nuclear transport factor 2-like export factor 2.
   
 
 0.940
ENSDARP00000153311
Helicase ATP-binding domain-containing protein.
    
 0.939
nup35
Nucleoporin NUP35; Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors (By similarity); Belongs to the Nup35 family.
     
 0.908
fancm
FA complementation group M.
    
  0.905
nutf2
Novel protein similar to vertebrate nuclear transport factor 2 (NUTF2).
  
 
 
0.903
fancg
FA complementation group G.
   
  0.887
cenpx
Centromere protein X.
    
 0.841
faap24
FA core complex-associated protein 24.
   
  0.824
fancc
FA complementation group C.
   
  0.822
fancf
FA complementation group F.
    
  0.819
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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