STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zc3h15Zinc finger CCCH domain-containing protein 15; Protects drg1 from proteolytic degradation. (433 aa)    
Predicted Functional Partners:
drg1
Developmentally-regulated GTP-binding protein 1.
   
 
 0.998
drg2
Developmentally-regulated GTP-binding protein 2.
   
 
 0.962
dusp28
Dual-specificity phosphatase 28.
   
  
 0.876
B8JLK9_DANRE
Si:dkey-69o16.5.
      
 0.861
rps5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.854
faub
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.851
faua
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.851
arf3a
ADP-ribosylation factor 3a; Belongs to the small GTPase superfamily. Arf family.
 
    
 0.840
proca-2
Protein C (inactivator of coagulation factors Va and VIIIa), a.
      
 0.840
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.837
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.