Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
serpind1Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family. (507 aa)    
Predicted Functional Partners:
f2
Coagulation factor II (thrombin); Belongs to the peptidase S1 family.
   
 0.989
serpinc1
Serine (Or cysteine) proteinase inhibitor, clade C (Antithrombin), member 1; Belongs to the serpin family.
  
 
0.982
serpine2
Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2; Belongs to the serpin family.
  
  
0.921
fgg
Fibrinogen, gamma polypeptide.
   
 0.880
serpinf2a
Alpha-2-antiplasmin; Belongs to the serpin family.
  
 
0.869
fgb
Fibrinogen, B beta polypeptide.
   
 0.864
c5
Complement component 5.
   
  
 0.863
serpinf2b
Alpha-2-antiplasmin; Belongs to the serpin family.
  
 
0.862
snap29
Synaptosome-associated protein 29.
      
 0.861
fga
Fibrinogen alpha chain.
   
 0.858
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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