STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pck1Phosphoenolpyruvate carboxykinase 1 (soluble). (630 aa)    
Predicted Functional Partners:
pklr
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.974
mdh1aa
Malate dehydrogenase.
  
 
 0.963
cs
Citrate synthase, mitochondrial.
   
 
 0.963
aclya
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
   
 
 0.959
eno1a
Enolase 1a, (alpha).
     
 0.956
eno3
Enolase 3, (beta, muscle).
   
 
 0.955
mdh2
Malate dehydrogenase.
  
 
 0.952
eno2
Eno2 protein.
     
 0.950
eno4
Enolase 4; Belongs to the enolase family.
     
 0.950
eno1b
Enolase 1b, (alpha).
     
 0.950
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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