STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bsgBasigin. (404 aa)    
Predicted Functional Partners:
xkr8.3
XK-related protein.
    
 
 0.846
slc16a4
Solute carrier family 16 member 4.
   
 
 0.735
ppib
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.726
gsap
Gamma-secretase-activating protein.
   
  
 0.717
slc16a3
Solute carrier family 16 member 3.
   
 
 0.696
cd44a
CD44 molecule (Indian blood group) a.
    
 
 0.695
slc16a8
Solute carrier family 16 member 8.
   
 
 0.681
slc16a1b
Solute carrier family 16 (Monocarboxylic acid transporters), member 1.
   
 
 0.601
htr2b
5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled.
    
 
 0.597
ajap1
Adherens junctions-associated protein 1.
      
 0.590
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.