Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
crybg1bCrystallin beta-gamma domain-containing 1b; Belongs to the beta/gamma-crystallin family. (3043 aa)    
Predicted Functional Partners:
cryabb
Crystallin, alpha B, b; Belongs to the small heat shock protein (HSP20) family.
      
 0.719
mrpl2
Mitochondrial ribosomal protein L2.
    
 
 0.628
hsf4
Heat shock transcription factor 4.
    
 
 0.598
mipb
Major intrinsic protein of lens fiber b; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.597
sil1
SIL1 nucleotide exchange factor.
    
 
 0.517
foxe3
Forkhead box E3.
    
 
 0.459
tdrd7b
Tudor domain-containing protein 7B; Component of specific cytoplasmic RNA granules involved in post-transcriptional regulation of specific genes: probably acts by binding to specific mRNAs and regulating their translation. Probably required during spermatogenesis (By similarity).
      
 0.443
ENSDARP00000139721
Si:dkeyp-97a10.2.
    
  0.442
E7FA88_DANRE
Si:ch211-181d7.3.
    
 
 0.430
stx3a
Syntaxin 3A; Belongs to the syntaxin family.
    
 0.403
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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