STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttyh2lProtein tweety homolog 2-like; Probable large-conductance Ca(2+)-activated chloride channel. Belongs to the tweety family. (531 aa)    
Predicted Functional Partners:
necab2
N-terminal EF-hand calcium-binding protein 2.
   
 
 0.748
dnai2a
Dynein, axonemal, intermediate chain 2a.
 
    
 0.745
dnajc9
DnaJ (Hsp40) homolog, subfamily C, member 9.
      
 0.742
arl13a
ADP-ribosylation factor-like 13A.
   
  
 0.730
mansc1
MANSC domain-containing 1.
    
 
 0.623
col4a5
Collagen, type IV, alpha 5 (Alport syndrome).
      
 0.534
lman2
Lectin, mannose-binding 2.
    
 
 0.487
fam189a2
Family with sequence similarity 189 member A2.
      
 0.481
rnf150a
Ring finger protein 150a.
      
 0.480
retreg3
Reticulophagy regulator family member 3.
    
 
 0.464
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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